Tags in templates affect the tag pane
I use the tag pane to keep track of files that are in-progress, similarly to @tallguyjenks. I put a tag in my templates to make sure that all new notes are marked as “in progress.” In doing so, I can keep track of notes I am working on by checking the tag pane. I delete this tag from notes when they are no longer a work-in-progress. Since my templates include tags, they affect the tag pane. Even if I there are no notes with a tag, the tag will still show up in the tag pane, making me think I have notes that are unfinished, when in reality, there are only templates with the tag.
Proposed solution
It would be great to be able to choose certain files or folders to be excluded from affecting the tag pane. This way, tags would only show up in the tag pane if there was a note, not a template with the tag. This would allow people like me to see if there were any notes that were unfinished with just a glance at the tag pane.