I typed up a couple of very math-heavy notes and connected them through internal links.
I’m usually using the “Extended MathJax” and “Admonition” community plugins, but the error persists after disabling and restarting Obsidian.
Expected result
Have all notes that are linked through an internal link of the form “[[…]]” with each other be connected in the (global) graph.
Actual result
Some of the notes are connected, some aren’t even though they’re linked in various other notes.
When I open one of these “connecting notes” and explicitly follow the internal link to the note that is displayed as unconnected in the graph view, the graph-view adapts and now lists the note as connected.
It still doesn’t find all notes connected to the given note though.
The only filter I have enabled is “Orphans” (at least in the “Filters” Section of the graph view – is there another place for other filters?).
The problem is that it shows orphans that aren’t actually orphans.
The local graph view also doesn’t show these links, except if I explicitly follow an internal link on some note through that “pseudo-orphan” (same thing with the global graph view).