Multiline formulae lead to unwanted paragraphs

When writing a formula like this, it will be treated as one single paragraph.

This is a matrix
$$ A = \begin{matrix} 1 & 2 \\ 3 & 4 \end{matrix}. $$

However, when I write the formula within several lines (to make the code look nicer), the formula itself will creat a new paragraph.

This is a matrix
$$
A = \begin{matrix}
    1 & 2 \\
    3 & 4
\end{matrix}.
$$

Sometime I write a theorem using such formulae, and then refer to the theorem using a link [[^label]]. However, the link can only refer to one paragraph. The problem make the theorem to be separated into several paragraphs. This means that I am only allowed to see the partial theorem by pressing ctrl on the link.

Curently, the problem can be solved by adding intentation to the formula. However, this is not compatible with some other markdown readers. For example, in VSCode a $$ ... $$ block should not have any indentation, unless the Markdown Preview Enhanced extension has been installed.

This is a matrix
    $$
    A = \begin{matrix}
        1 & 2 \\
        3 & 4
    \end{matrix}.
    $$

I believe this is a bug, because VSCode does not have the same problem with the Markdown Preview Enhanced extension.

moved to help for not following the bug report template

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